GABRIELE MICALI
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Microbial
​Ecology

Our main goal is to understand how microbial communities work: How do bacteria respond to environmental changes? How do they interact with other bacteria? Can we predict properties and functions that emerge in self-organising microbial communities?

We focus on bacteria that compose the human microbiome in order to understand their role in shaping the health and diseases of our species. We are interested in building a mechanistic understanding of how pathogenic strains are able to establish, grow, and survive in our bodies.

To achieve this, we combine theory, stochastic simulations, and experiments. In particular, we perform microfluidic experiments that allow the quantification of individual cell properties over space and time. We use machine learning algorithms to segment and track each individual cell for days. We combine large datasets of individual cell properties with mathematical models and theories (videos). This interdisciplinary approach to science is a core feature of our group. 

The group is led by Gabriele Micali and is hosted by IRCCS Istituto Clinico Humanitas and has close collaborations with the Human Technopole. We will be located in Milano, Italy. 

We are looking for new people joining our team. ​Learn how to join us!

Fundings:

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NEWS
​

we are looking for a Research Assistant and a PhD student


- 31 January 2023: Hannah is leaving us and Abhishek is joining us 

- 16 August 2022: ISME18 - follow my presentation today at 12.00
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- May 2022: Hannah Raasch joined the group, welcome!  


- April 2022: first day at Humanitas

- January 2022:
Our new paper with Davide Ciccarese et al. is published in ISME J. 


- 06 October 2021:
Our new paper with Alexandra Colin, Marco Cosentino Lagomarsino and Sven van Teeffelen, on division control in E. coli, is published in eLife

- 28 September 2021:
We are among the five winners of the first Early Career Fellowships of the Human Technopole.  We will be working at Humanitas in Milan. News coverage.

- 03 August 2021:
Our new paper with Alyson Hockenberry and the MSE group, on microbiota-derived metabolites and their impact on Salmonella, is published in PNAS.

All news

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